Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001599515.1_202016-03-01] 19 sequences; 46,178,503 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 4e-13 >seq7 Length=3608416 Score = 89.7 bits (98), Expect = 4e-13 Identities = 270/413 (65%), Gaps = 27/413 (7%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 ||||| | |||||||| || || || ||| |||||| | ||||| || || | | Sbjct 2711434 GGACTACTACTTTATGGCCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGC 2711493 Query 19408 AAATTACTTACAAAACAACCTCCCA----AAATTGTAAATGGTCCTGAAATCTTAAATAA 19463 ||| ||| | |||| || |||| | ||||| |||||||| ||| | | || || Sbjct 2711494 AAA--ACT--CTAAACGCCCACCCACCTAAGATTGTCAATGGTCCCGAAGTGCTGAACAA 2711549 Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGA--A 19521 | ||| |||||||| || || || | || |||| || || || || |||| | Sbjct 2711550 GTTTGTGGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 2711609 Query 19522 CAA--AAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGAC 19578 ||| ||| |||| | | | ||| | | ||||| || || | ||||| | || Sbjct 2711610 CAAGGAAA-----AGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGAT 2711664 Query 19579 GCAATCTGTAAGCAAAGAGGTTC---------TGGTGTAAATGGAGTACATGACACTGTT 19629 || | |||||||| ||||||| ||| | | || || ||| |||||| Sbjct 2711665 GCTGTTTGTAAGCAGCGAGGTTCCGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTT 2711724 Query 19630 GTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATT 19689 ||||| || ||||| | ||| | || ||||| || |||| || ||||| | | || Sbjct 2711725 GTCAACCAGCTCCTTGCCAAACTCGATGGTGTGGACAAACTTAACAATATCCTTTTGATC 2711784 Query 19690 GGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742 |||||||| ||| || ||| | || ||| || || |||||||||| || Sbjct 2711785 GGCATGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 2711837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455907964095