Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10] 1,978 sequences; 48,996,880 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1180 89.7 4e-13 >seq1180 Length=846099 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || || |||||| | ||| | |||||| |||||||||| |||||||| ||||| || Sbjct 496888 GACAAGGAGGGTATTCCTCCCGATCAACAGCGACTTATCTTCGCTGGCAAGCAACTTGAG 496829 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| |||| | |||| ||||| |||||||||||||||||||| || |||| | Sbjct 496828 GATGGCCGAACTCTTTCCGACTACAACATTCAGAAGGAATCTACTCTCCACTTGGTTCTC 496769 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 496768 CGTCTTCGTGGTGG 496755 Score = 87.8 bits (96), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCT 21966 || ||||| ||| ||| ||||| |||||| | ||| |||| ||| | || |||| Sbjct 497136 ATGTTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAGCGCCTGATCT 497077 Query 21967 TTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAAT 22026 ||||||| || ||||| ||||| ||| | ||||| ||||| ||||||||||||| Sbjct 497076 TTGCTGGAAAGCAACTCGAAGACGGCCGAACCCTTGCCGACTACAACATTCAGAAGGAAT 497017 Query 22027 CTACTCTTCAT 22037 |||| |||||| Sbjct 497016 CTACCCTTCAT 497006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358116166730212