Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10]
1,978 sequences; 48,996,880 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq469 116 4e-21
>seq469
Length=114326
Score = 116 bits (128), Expect = 4e-21
Identities = 318/482 (66%), Gaps = 9/482 (2%)
Strand=Plus/Minus
Query 154629 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 154686
|| || ||| | || |||||||||||| ||| || || | || ||| | || ||||
Sbjct 45707 CAGCCCAACTCTGGTGCACAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 45650
Query 154687 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 154745
| | ||| || || | ||||| |||| || || | || || | || || || ||
Sbjct 45649 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCGGCTCACGGT 45591
Query 154746 ACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 154805
|| || |||||| ||||| |||||| || ||||| ||||| |||||||||||| | |
Sbjct 45590 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 45531
Query 154806 GA---TGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 154862
| ||| ||| | || ||| | ||||| || || ||| | | | ||||
Sbjct 45530 AAGACTGGCAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAA 45471
Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922
|| | ||| ||| |||| || || ||||| ||||| || || || | || |
Sbjct 45470 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 45411
Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982
|| | ||| | | || || || |||| |||| || || | || || || || |
Sbjct 45410 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 45351
Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042
|| || ||| | || || | || |||| |||||| ||||| || ||||| |||
Sbjct 45350 AACGCCCAGATCGGTCTTTGCAGCCCCGGTGACATTGGTGCTGATGTTTGCCATCTCAAC 45291
Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102
| || || || ||||||||||| || || || || ||||| || || || ||||| | |
Sbjct 45290 CTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGTGGTCCCGGTGTTGGCCCTATCGCT 45231
Query 155103 GT 155104
||
Sbjct 45230 GT 45229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579198478963520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |