Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F001703125.1_202016-08-10] 1,978 sequences; 48,996,880 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1658 96.9 3e-15 >seq1658 Length=732392 Score = 96.9 bits (106), Expect = 3e-15 Identities = 270/409 (66%), Gaps = 19/409 (5%) Strand=Plus/Minus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 ||||| | ||||||||||| || || ||| |||||| | ||||| || || | || Sbjct 268097 GGACTACTACTTTATGGGCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGT 268038 Query 19408 AAATTACTTACAAAAC----AACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAA 19463 ||| ||| | |||| | || || || ||||| ||||| || ||| | | ||||| Sbjct 268037 AAA--ACT--CTAAACGCCCATCCACCTAAGATTGTCAATGGCCCCGAAGTGCTGAATAA 267982 Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACA 19523 | ||| |||||||| || || || | || |||| || || || || |||| | Sbjct 267981 GTTTGTTGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 267922 Query 19524 AAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAA 19582 || | |||| | | | ||| | | ||||| || || | ||||| | || || Sbjct 267921 TAAG-GAAAAGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGATGCTG 267863 Query 19583 TCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGT-ACA--------TGACACTGTTGTCA 19633 | |||||||| |||||||||| ||| | ||| ||| |||||||||| Sbjct 267862 TTTGTAAGCAGCGAGGTTCTGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTTGTCA 267803 Query 19634 ATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCA 19693 | || ||||| | ||| | || ||||| || |||| || ||||| | | || |||| Sbjct 267802 ACCAGCTCCTTGCCAAACTCGATGGTGTGGACAAACTTAACAATATCCTTTTGATCGGCA 267743 Query 19694 TGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742 |||| ||| || ||| | || ||| || || |||||||||| || Sbjct 267742 TGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 267694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446418577890