Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq1133 125 9e-24 >seq1133 Length=16857 Score = 125 bits (138), Expect = 9e-24 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 10207 TAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAG 10266 ||||| || ||||||| || |||||| ||||| |||||||| || | | ||||| Sbjct 4609 TAAAGGTCTTCCTCTTGGTGGGTCTCAATAACACAGTCGCTCGTCGGCTTGGCGACACAA 4550 Query 10267 GTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCT 10326 | || |||| | ||||| || |||||||| ||||| ||||||| |||||| Sbjct 4549 AGTACAACATAACCCGACTCGATTTGATCATCATCTAGGAAGCTCTGATCGCCTTGATCC 4490 Query 10327 ACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAG 10386 || || || || | | ||| || | || | ||||| || ||||| ||||| |||||| Sbjct 4489 ACGGTTCCAGAAACCAATTTACCAGAGCAGGTGGAACAAGCCCCAGCACGGCATGAGTAG 4430 Query 10387 TTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACACTCA 10446 | ||| |||||| || ||||| ||||||||||||| | |||||||| || ||| Sbjct 4429 GGCAAGTCTATGCCTTTCTCCTCAGCTACATCCAGAATGTATTCATCGTCAGGGCATTCA 4370 Query 10447 AA 10448 || Sbjct 4369 AA 4368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622114869332880