Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq890 86.0 4e-12 >seq890 Length=577872 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || ||||||||||| ||||| ||||| |||| || | || Sbjct 199460 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 199519 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| |||||||| || ||||| || | || | || || ||||| ||| || Sbjct 199520 TTGCCGGCGAAAATCAAGCGTTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTT- 199578 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | |||||| || || || || | ||||| || || || || Sbjct 199579 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 199638 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || || || || ||||||||||| Sbjct 199639 CAAGGTCTTGACGAAGATCTGCAT 199662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698884235840