Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27]
1,277 sequences; 50,403,639 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq990 93.3 1e-13
>seq990
Length=469732
Score = 93.3 bits (102), Expect = 1e-13
Identities = 353/543 (65%), Gaps = 17/543 (3%)
Strand=Plus/Plus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| |||||||||||||| |||||||| | || |||||| | || ||
Sbjct 111253 TTCTGGACCGCTGAGGAGATTGATCTTTCCAAGGATCTCCATGACTGGAACAACCGCCTG 111312
Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGAC 443453
|| | |||| | | |||||| | |||| | || ||||| || || ||
Sbjct 111313 ACTGCCGATGAGC---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCGTCTGAT 111369
Query 443454 GGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCC 443513
||||| ||| ||||| || || ||| ||| | ||| | | |||||||
Sbjct 111370 GGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCT 111429
Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573
|| | |||||||| ||||| | ||||||||||| ||| ||||| |||| | |
Sbjct 111430 CGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTG 111489
Query 443574 TTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCTC-ATCGTTCAT 443632
| || | || ||| || || || || ||||| || | ||| | || |||
Sbjct 111490 CTCATTGACAC-CTACATC--AAGGAGCCCGCTCAGCGAACCTACCTCTTTAACGC-CAT 111545
Query 443633 ---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689
||||| || ||||| | ||| | |||||| | | ||| || | || |
Sbjct 111546 TGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAG-GATA 111604
Query 443690 AAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748
| ||| | || | | |||| || || ||||| |||| || || || | || || |
Sbjct 111605 AGGACTCCTCCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCA 111664
Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808
| || || || ||||| ||||||||| | || |||||||| || |||| ||||||||||
Sbjct 111665 GTGGT-GCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACC 111723
Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868
|| ||||| || ||| ||| || |||||| | || ||||| ||||| || |||
Sbjct 111724 TTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCTC 111783
Query 443869 TAC 443871
||
Sbjct 111784 CAC 111786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588310012341265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |