Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq990 93.3 1e-13 >seq990 Length=469732 Score = 93.3 bits (102), Expect = 1e-13 Identities = 353/543 (65%), Gaps = 17/543 (3%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||||||||| |||||||| | || |||||| | || || Sbjct 111253 TTCTGGACCGCTGAGGAGATTGATCTTTCCAAGGATCTCCATGACTGGAACAACCGCCTG 111312 Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGAC 443453 || | |||| | | |||||| | |||| | || ||||| || || || Sbjct 111313 ACTGCCGATGAGC---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCGTCTGAT 111369 Query 443454 GGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCC 443513 ||||| ||| ||||| || || ||| ||| | ||| | | ||||||| Sbjct 111370 GGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCT 111429 Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573 || | |||||||| ||||| | ||||||||||| ||| ||||| |||| | | Sbjct 111430 CGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTG 111489 Query 443574 TTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCTC-ATCGTTCAT 443632 | || | || ||| || || || || ||||| || | ||| | || ||| Sbjct 111490 CTCATTGACAC-CTACATC--AAGGAGCCCGCTCAGCGAACCTACCTCTTTAACGC-CAT 111545 Query 443633 ---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689 ||||| || ||||| | ||| | |||||| | | ||| || | || | Sbjct 111546 TGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAG-GATA 111604 Query 443690 AAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748 | ||| | || | | |||| || || ||||| |||| || || || | || || | Sbjct 111605 AGGACTCCTCCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCA 111664 Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808 | || || || ||||| ||||||||| | || |||||||| || |||| |||||||||| Sbjct 111665 GTGGT-GCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACC 111723 Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868 || ||||| || ||| ||| || |||||| | || ||||| ||||| || ||| Sbjct 111724 TTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCTC 111783 Query 443869 TAC 443871 || Sbjct 111784 CAC 111786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588310012341265