Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq1133 98.7 1e-15 >seq1133 Length=16857 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 170979 TTTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTG 171038 |||||||| |||| ||| |||| ||||| |||| ||||| || ||| | || ||| Sbjct 4368 TTTGAATGCCCTGACGATGAATACATTCTGGATGTAGCTGAGGAGAAAGGCATAGACTTG 4427 Query 171039 AACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCT 171098 ||| || || |||||||| |||||||| ||||| |||| ||| | | ||| | Sbjct 4428 CCCTACTCATGCCGTGCTGGGGCTTGTTCCACCTGCTCTGGTAAATTGGTTTCTGGAACC 4487 Query 171099 GTTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTT 171150 || |||||| |||||| ||||| ||||||||||| || || || |||| Sbjct 4488 GTGGATCAAGGCGATCAGAGCTTCCTAGATGATGATCAAATCGAGTCGGGTT 4539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622060470201240