Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value SEQ11088 82.4 7e-11 >SEQ11088 Length=795 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389 ||||| || |||||||| |||| ||| | ||| ||||| | | || ||| || || Sbjct 192 AGCTGCGCAATCCTGTCGCCCTCCTTGATCTCGTAGTCGGTCTCGGCGTGGTTGAAGAGG 133 Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449 | ||| ||| | || |||||||| |||| || ||||| || ||| |||||| ||| Sbjct 132 AGGACCTTGACCTCACCGCGGTAGTCGGCGTCAATCACGCCGGCACCCGTGTCGATGAAG 73 Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCC 5487 | ||| |||||||||||| || || || || || || Sbjct 72 TTCTTGGACGCAAGGCCGGATCGGGGGGCGATACGGCC 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447686696311840