Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value SEQ11088 111 1e-19 >SEQ11088 Length=795 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 5555 ACCTCTTCCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCC 5613 ||||| | ||||||||| | || |||||| || ||||||||| || | |||||| Sbjct 231 ACCTCGACGACATCGGGGGT-GTAGATGCGCTCCAGGACCAGCTGCGCAATCCTGTCGCC 173 Query 5614 CGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCG 5673 | ||| | |||| | ||| | | | || |||||| || | || || | ||||| Sbjct 172 CTCCTTGATCTCGTAGTCGGTCTCGGCGTGGTTGAAGAGGAGGACCTTGACCTCACCGCG 113 Query 5674 GTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGA 5733 |||||||||||| |||||||| || ||| ||||||||||| |||| ||| |||||||| Sbjct 112 GTAGTCGGCGTCAATCACGCCGGCACCCGTGTCGATGAAGTTCTTGGACGCAAGGCCGGA 53 Query 5734 GCGGGGAGCCACGCGGCC 5751 ||||| || | ||||| Sbjct 52 TCGGGGGGCGATACGGCC 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429994743659984