Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27]
11,382 sequences; 59,420,771 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq9 98.7 1e-15
seq36 84.2 2e-11
>seq9
Length=577821
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | |||||||| | || || | ||| | || ||| |
Sbjct 199170 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 199111
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | || || ||||| ||||| || || || ||||||||||||
Sbjct 199110 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 199051
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||||||| | || ||||| ||||| || |||| ||| | |||||| |||
Sbjct 199050 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 198991
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || ||||||||| |||| |||| ||
Sbjct 198990 ATTCAGAAGGAATCTACTCTCCACTTGGTTCT 198959
>seq36
Length=946076
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || || || | || || || |||||||| | || | || ||
Sbjct 439512 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 439453
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|||||||||||| | ||||| ||||| ||||| || || || || || ||
Sbjct 439452 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 439393
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| || ||||||| | | ||||| || ||||| |||| | | | | ||||||||
Sbjct 439392 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTGAGCGACTA 439333
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || || |||| ||||||||
Sbjct 439332 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 439297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478594298307040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |