Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27]
11,382 sequences; 59,420,771 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq220 352 7e-92
>seq220
Length=1138922
Score = 352 bits (390), Expect = 7e-92
Identities = 1119/1702 (66%), Gaps = 52/1702 (3%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458
||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| ||
Sbjct 1220 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 1278
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516
||| ||| | |||||||| || ||||||| ||| || || |||| || ||| |
Sbjct 1279 GCACATGATCATGCGTGTGTCTGTTGGTAT---TTG---GGGTGATGATATCGAGCGAGT 1332
Query 363517 ----GAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAACAAT 363569
|| ||||| || || | || || | | ||||| || ||| | || || |
Sbjct 1333 CTTGGAGACATACAACCTGAT--GTCCAGCAAAT-TCTTCACACATGCCTCTCCCACGCT 1389
Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629
| ||| || || || | | | || || |||| |||||||| | | | ||||||||
Sbjct 1390 CTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGA 1449
Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689
||| || ||||| |||| || || || |||| ||||| | || ||||||| ||
Sbjct 1450 CGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 1509
Query 363690 AGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747
|| || |||||| | | || | ||| | | ||||| || | | ||||| |||
Sbjct 1510 TGGTGGTATTGGTCTGAACG-TGCACCGTATCCGTGCTACTGG-CTCCTACATCGCCGGT 1567
Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| || ||| ||||| || | ||||| ||||||||||| || |||| ||||| |
Sbjct 1568 ACCAACGG-TACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1626
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
|| |||||||||||||| ||||| || || ||||| || || |||||||||
Sbjct 1627 CTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1686
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| | ||| | || ||||| ||||| ||||| || ||| || |||||||| | ||
Sbjct 1687 GCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCG 1746
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
||| ||||| || ||| || |||||| | |||| | ||| |||||||| || ||
Sbjct 1747 TGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 1804
Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | | | | ||| | || | ||||| |||| || || || || |||| |
Sbjct 1805 AAGAACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1864
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
|| || || | | ||||| ||||||||||| || |||||| |||| ||| |||||
Sbjct 1865 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACT 1924
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || ||||| || |||| ||||| | || | |||| |||||| |||| ||
Sbjct 1925 ATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCA 1984
Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224
| ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | |
Sbjct 1985 TTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 2043
Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
| | || |||||| || || || |||||||| ||| || || |||||| || ||
Sbjct 2044 CCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGT 2103
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337
|| |||||||| || | || || || | || | | | |||| || | ||
Sbjct 2104 CTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCATCAACTACGATGAGGCTTGCTACGA 2163
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397
| | || | | | | || | | || || | |||| || ||||| | |||||
Sbjct 2164 CTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGA 2223
Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456
||| | || || ||| | || | || ||| ||||| || || || ||||
Sbjct 2224 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 2282
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514
|||||||||| |||||||| || || | ||| | ||||| ||| | || || ||
Sbjct 2283 GTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTC 2340
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || ||||||| || || ||| ||||||| || || || || || || | ||
Sbjct 2341 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTCAC 2400
Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633
|| || |||| | |||| || |||| ||||| || | | || |||||
Sbjct 2401 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCCCG 2459
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
|| |||| | ||||||| || | ||||| |||| ||| |||| || ||| |||
Sbjct 2460 CCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 2519
Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAG 364750
|||| || || || | || |||| || || | || ||| || ||| || |
Sbjct 2520 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT---G 2576
Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810
| || ||||| ||||| ||| | ||||| || || ||||||||||||||||| || |
Sbjct 2577 CTCCTATGCCTACGGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCT 2636
Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870
|| ||| | || ||| || ||||| | || || || | ||| || || |
Sbjct 2637 ACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCT 2696
Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930
|| ||||||| ||| |||| || |||||| || ||||||||| ||||
Sbjct 2697 GGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCA 2756
Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990
| || | |||||||| | ||||||||||| | || | ||| | ||| || | |
Sbjct 2757 TTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGT 2816
Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050
| || ||||| ||||| || || ||| || || | ||||| || ||||| ||||
Sbjct 2817 ATAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGTG 2876
Query 365051 CTTTTATCTGTCAGAGCCAGTC 365072
| || || |||| ||||||
Sbjct 2877 CCTTCATTGATCAGTCCCAGTC 2898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303163529500724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |