Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq89 104 3e-17 >seq89 Length=16986 Score = 104 bits (114), Expect = 3e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 158213 GAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGT 158272 || ||| |||||||||| || | ||| || || ||| | || | |||||| || Sbjct 4380 GACGATGAATACATTCTGGATGTAGCTGAGGAGAAAGGCATAGACTTGCCCTACTCATGC 4439 Query 158273 CGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGT 158332 |||||||| ||||| || | || | |||||| | || |||||||| || ||||| | Sbjct 4440 CGTGCTGGGGCTTGTTCCACCTGCTCTGGTAAATTGGTTTCTGGAACCGTGGATCAAGGC 4499 Query 158333 GATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCA 158392 |||||| |||||||| ||||||||||||| | || | |||| | ||||| || Sbjct 4500 GATCAGAGCTTCCTAGATGATGATCAAATCGAGTCGGGTTATGTTGTACTTTGTGTCGCC 4559 Query 158393 TATCCAACATCTGATTGTGTTGTTGTTACTGATCAAGAGGAGAACCTTTA 158442 | || || || |||||| ||| || | |||||||| ||||||| Sbjct 4560 AAGCCGACGAGCGACTGTGTTATTGAGACCCACCAAGAGGAAGACCTTTA 4609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545196021198560