Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq89 84.2 3e-11 >seq89 Length=16986 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 177381 GACGATCAGTACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATATTAATTACTCATGC 177440 |||||| | ||||| || || | ||||| || ||| | || | ||||||||| Sbjct 4380 GACGATGAATACATTCTGGATGTAGCTGAGGAGAAAGGCATAGACTTGCCCTACTCATGC 4439 Query 177441 CGCGCTGGTGCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTAGTGTAGATCAAAGC 177500 || ||||| |||||||| |||| |||||||| | | ||| | || |||||| || Sbjct 4440 CGTGCTGGGGCTTGTTCCACCTGCTCTGGTAAATTGGTTTCTGGAACCGTGGATCAAGGC 4499 Query 177501 GATCAATCGTTCTTGGATGACGATCAAATGGAGTCAGGATTTATTCTGACCTGTGTGT-- 177558 ||||| ||| | ||||| |||||||| ||||| || |||| || || ||||| Sbjct 4500 GATCAGAGCTTCCTAGATGATGATCAAATCGAGTCGGG--TTATGTTGTACTTTGTGTCG 4557 Query 177559 CATATCCCACCAGCGATTGTGT 177580 | | || || ||||| ||||| Sbjct 4558 CCAAGCCGACGAGCGACTGTGT 4579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610242765356160