Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq36 89.7 4e-13 >seq36 Length=946076 Score = 89.7 bits (98), Expect = 4e-13 Identities = 271/413 (66%), Gaps = 27/413 (7%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 ||||| | ||||||||||| || || ||| |||||| | ||||| || || | | Sbjct 316597 GGACTACTACTTTATGGGCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGC 316656 Query 19408 AAATTACTTACAAAAC----AACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAA 19463 ||| ||| | |||| | || || || ||||| ||||| || ||| | | ||||| Sbjct 316657 AAA--ACT--CTAAACGCCCATCCACCTAAGATTGTCAATGGCCCCGAAGTGCTGAATAA 316712 Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGA--A 19521 | ||| |||||||| || || || | || |||| || || || || |||| | Sbjct 316713 GTTTGTTGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 316772 Query 19522 CAA--AAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGAC 19578 ||| ||| |||| | | | ||| | | ||||| || || | ||||| | || Sbjct 316773 CAAGGAAA-----AGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGAT 316827 Query 19579 GCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGT-ACA--------TGACACTGTT 19629 || | |||||||| |||||||||| ||| | ||| ||| |||||| Sbjct 316828 GCTGTTTGTAAGCAGCGAGGTTCTGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTT 316887 Query 19630 GTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATT 19689 ||||| || ||||| | ||| | || || || || |||| || ||||| | | || Sbjct 316888 GTCAACCAGCTCCTTGCCAAACTCGATGGCGTGGACAAACTTAACAATATCCTTTTGATC 316947 Query 19690 GGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742 |||||||| ||| || ||| | || ||| || || |||||||||| || Sbjct 316948 GGCATGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 317000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397400865648910