Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233955.1_202017-07-27] 11,382 sequences; 59,420,771 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq91 93.3 1e-13 >seq91 Length=469747 Score = 93.3 bits (102), Expect = 1e-13 Identities = 353/543 (65%), Gaps = 17/543 (3%) Strand=Plus/Minus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||||||||| |||||||| | || |||||| | || || Sbjct 358507 TTCTGGACCGCTGAGGAGATTGATCTTTCCAAGGATCTCCATGACTGGAACAACCGCCTG 358448 Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGAC 443453 || | |||| | | |||||| | |||| | || ||||| || || || Sbjct 358447 ACTGCCGATGAGC---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCGTCTGAT 358391 Query 443454 GGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCC 443513 ||||| ||| ||||| || || ||| ||| | ||| | | ||||||| Sbjct 358390 GGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCT 358331 Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573 || | |||||||| ||||| | ||||||||||| ||| ||||| |||| | | Sbjct 358330 CGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTG 358271 Query 443574 TTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCTC-ATCGTTCAT 443632 | || | || ||| || || || || ||||| || | ||| | || ||| Sbjct 358270 CTCATTGACAC-CTACATC--AAGGAGCCCGCTCAGCGAACCTACCTCTTTAACGC-CAT 358215 Query 443633 ---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689 ||||| || ||||| | ||| | |||||| | | ||| || | || | Sbjct 358214 TGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAG-GATA 358156 Query 443690 AAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748 | ||| | || | | |||| || || ||||| |||| || || || | || || | Sbjct 358155 AGGACTCCTCCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCA 358096 Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808 | || || || ||||| ||||||||| | || |||||||| || |||| |||||||||| Sbjct 358095 GTGGT-GCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACC 358037 Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868 || ||||| || ||| ||| || |||||| | || ||||| ||||| || ||| Sbjct 358036 TTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCTC 357977 Query 443869 TAC 443871 || Sbjct 357976 CAC 357974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588104369982990