Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233985.1_202017-07-27] 1,275 sequences; 50,410,650 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq662 93.3 6e-14 >seq662 Length=16447 Score = 93.3 bits (102), Expect = 6e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 171138 GATCAATACATCCTAGATGCCGCAGAGGAAGCGGGTGTATATCTCCCATATTCATGTAGA 171197 ||| ||||||| || |||| || ||||| || || | | || || ||||| | Sbjct 12377 GATGAATACATTCTGGATGTAGCTGAGGAGAAAGGCATAGACTTGCCCTACTCATGCCGT 12318 Query 171198 GCTGGTGCTTGTTCATCCTGTGCAGGTAAGATTGTATCTGGAAAGGTGAATCAAGAAGAC 171257 ||||| |||||||| |||| | ||||| | || ||||||| ||| |||||| || Sbjct 12317 GCTGGGGCTTGTTCCACCTGCTCTGGTAAATTGGTTTCTGGAACCGTGGATCAAGGCGAT 12258 Query 171258 CAGTCATTCTTAGATGATGATCAGATCGAAGCAGGTTTCGCACTCTTATGTGTAGCTTAT 171317 ||| ||| ||||||||||||| ||||| | |||| | | | ||||| || | Sbjct 12257 CAGAGCTTCCTAGATGATGATCAAATCGAGTCGGGTTATGTTGTACTTTGTGTCGC-CAA 12199 Query 171318 GCCGA--ATCTGATTGTGTGATTGAGACGGAAAAAGAGGAAACCCTTTA 171364 ||||| | | || ||||| |||||||| | |||||||| |||||| Sbjct 12198 GCCGACGAGC-GACTGTGTTATTGAGACCCACCAAGAGGAAGACCTTTA 12151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729917966747000