Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233995.1_202017-07-27] 488 sequences; 47,233,678 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq471 89.7 5e-13 seq438 84.2 2e-11 >seq471 Length=1798895 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | ||||| || | || || | ||| | || ||| | Sbjct 91388 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATTACTCTGGAAGTCGAGTCATCC 91329 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || || ||||| ||||| || || || |||||||||||| Sbjct 91328 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 91269 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||||| | || ||||| ||||| || |||| ||| | |||||| ||| Sbjct 91268 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 91209 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||||||| |||| |||| || Sbjct 91208 ATTCAGAAGGAATCTACTCTCCACTTGGTTCT 91177 >seq438 Length=150773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 38499 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 38440 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || || || Sbjct 38439 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 38380 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || ||||||| | | ||||| || ||||| |||| | | | | |||||||| Sbjct 38379 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTGAGCGACTA 38320 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || |||| |||||||| Sbjct 38319 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 38284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659480159360