Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233995.1_202017-07-27] 488 sequences; 47,233,678 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq126 96.9 3e-14 seq13 91.5 1e-12 >seq126 Length=133157 Score = 96.9 bits (106), Expect = 3e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 80826 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 80885 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || || ||||| |||| || |||| Sbjct 80886 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTCGGTGTCCCTCGCAGTATT 80945 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440 || | | || || | | ||||| ||| ||| Sbjct 80946 GCCAGGACCCTCACCTATCCCGAAACTGTGACA 80978 >seq13 Length=1380456 Score = 91.5 bits (100), Expect = 1e-12 Identities = 279/429 (65%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 1181818 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 1181877 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| ||||| || || || || | | ||||| Sbjct 1181878 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGGGCAGG 1181937 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| | || || || || ||| || || || Sbjct 1181938 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTGGTGCGTTGACGCTC 1181997 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| ||| |||||| ||| ||| || || || || | || | || || Sbjct 1181998 ACCCTCGTAAACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 1182057 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || || || || ||||| | || | |||||||| ||||||||||| Sbjct 1182058 GGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGGTCATCATACCACCAGC 1182117 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| || || | ||||| | || | ||| | || | || || Sbjct 1182118 GGTCTCGATACCGAGAGAGAGGGGCGCAACATCGAGAAGCAGAATCTCGTTGGTAGCCTT 1182177 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | ||| ||||| || || || | || ||||| || |||||||| || Sbjct 1182178 GCTGGAGGTGTCACCGGAGAGAATCGCAGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 1182237 Query 281797 ATCAGGATT 281805 |||||| || Sbjct 1182238 ATCAGGGTT 1182246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740606441262288