Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cubense_20[genbank_20GCA_5F001696625.1_2
02016-07-29] 1,370 sequences; 46,735,106 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq927 87.8 4e-12
>seq927
Length=143536
Score = 87.8 bits (96), Expect = 4e-12
Identities = 172/252 (68%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || ||| |||||||| || || ||||||||
Sbjct 92230 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 92171
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910
|| || || | | | | | |||||| || || | |||||| ||| | | ||
Sbjct 92170 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTGCCGGC 92112
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| || || ||||| |||||||| || || | | || ||||| || | ||||| ||
Sbjct 92111 GTTGAAGAGCGTGGGAGAAGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTC 92052
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
| ||| | ||| || || ||| || |||| ||||||||| ||||||| |||
Sbjct 92051 CAAGACTCGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTG 91992
Query 95031 AGGGCGCTCAAC 95042
||||||||| ||
Sbjct 91991 AGGGCGCTCGAC 91980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989566629708350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |