Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cubense_20[genbank_20GCA_5F001696625.1_2
02016-07-29] 1,370 sequences; 46,735,106 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 122 1e-22
>seq1001
Length=205063
Score = 122 bits (134), Expect = 1e-22
Identities = 338/513 (66%), Gaps = 9/513 (2%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| | ||||| || || || ||||| || || || || ||||||||||| ||||| ||
Sbjct 50606 ACAGCGATAGGGCCAACACCGGGACCACCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 50665
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||| || ||||| |||||| ||||| || | || || | ||| ||
Sbjct 50666 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAAAGGCCGATCTGGGCG 50725
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || ||||| || | || || |||| |||| || || || | | ||| |
Sbjct 50726 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGATCACAGACT 50785
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
|| |||| | | || || ||||| ||| || ||||| |||| ||| ||| |
Sbjct 50786 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAGGTAACCATGATAGCAGCA 50845
Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479
|| ||| | | | ||| || || ||||| | ||| || | ||| |||
Sbjct 50846 AGCTCATCAGCGTGCTTGACACACTTGGCCTTCAGATCCTCGATATCCAGGTTACCAGTC 50905
Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539
| | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| ||
Sbjct 50906 TTACCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 50965
Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598
|| || || || || | || || || || || |||| ||||| | || || ||| |
Sbjct 50966 GTACCGTGAGCCGAAACAGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCCTCG 51025
Query 138599 ATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGT 138656
|| || || | ||| || | || || ||| |||||||||||| || | ||| ||
Sbjct 51026 -TGGTAAGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGTGCACCAGAGTTGGGC 51082
Query 138657 TGTAATGATATAGAATCAAAACCTGTGATATCA 138689
|| | | ||| || | ||| ||||| |||
Sbjct 51083 TGAAGAGTGGTAGCGTCCATACCAGTGATCTCA 51115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578988484652400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |