Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cubense_20[genbank_20GCA_5F001696625.1_2 02016-07-29] 1,370 sequences; 46,735,106 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1302 89.7 2e-12 >seq1302 Length=29391 Score = 89.7 bits (98), Expect = 2e-12 Identities = 126/176 (72%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||| | | |||| || || || || |||| || || || | || || || || || | Sbjct 20961 CTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGT-GCCT 20903 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | ||||| ||||||||| | || |||||||| || |||| |||||||||||| |||| Sbjct 20902 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACG 20843 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 | || ||| ||| || |||||| | || ||||| ||||| || ||| || || Sbjct 20842 AGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCC 20787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588308119739650