Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702495
.1_202016-08-10] 1,129 sequences; 48,892,912 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1097 104 4e-18
seq742 100 4e-17
>seq1097
Length=481400
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| | | ||||| ||||| ||||||||||||||||| |||||
Sbjct 146667 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATTCAAGGAATCACCAAGCCCGCTAT 146725
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| ||||||||||| || ||||||||| | ||||
Sbjct 146726 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 146766
>seq742
Length=690179
Score = 100 bits (110), Expect = 4e-17
Identities = 85/102 (83%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | ||||| | ||||| |||||||| || ||||||||||| || |
Sbjct 14293 CGCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCCA 14235
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||| ||||| ||||| || ||||| ||||||||| ||||||
Sbjct 14234 TCCGACGTCTCGCTCGCCGAGGTGGTGTCAAGCGTATCTCTG 14193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074167747397
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |