Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702495 .1_202016-08-10] 1,129 sequences; 48,892,912 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq942 89.7 4e-13 >seq942 Length=1175861 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || || |||||| | ||| | |||||| |||| ||||| |||||||| ||||| ||| Sbjct 559443 GACAAGGAGGGTATTCCTCCCGATCAACAGCGACTCATCTTCGCTGGCAAGCAACTTGAA 559502 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| |||| | |||| ||||| |||||||||||||||||||| || |||| | Sbjct 559503 GATGGCCGAACTCTTTCCGACTACAACATTCAGAAGGAATCTACTCTCCACTTGGTTCTC 559562 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 559563 CGTCTTCGTGGTGG 559576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358119872314666