Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702495 .1_202016-08-10] 1,129 sequences; 48,892,912 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1086 84.2 9e-11 >seq1086 Length=725975 Score = 84.2 bits (92), Expect = 9e-11 Identities = 116/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||| || || |||||||| |||||||||||| || || Sbjct 124806 CTCAATCAAATGGGCAATTGTCATTCGCGATGGAATGGCGTGAGGGTTGATGATGATATC 124865 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || | | || | || ||||||||||||| || | | | | ||| || Sbjct 124866 GGGAGTAAGACCTTC---TCGGCTGAAAGGCATATCCTCCTGTCGATATGTAACACCGAT 124922 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 124923 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 124964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951946164080312