Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702495
.1_202016-08-10] 1,129 sequences; 48,892,912 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq1086 84.2 9e-11
>seq1086
Length=725975
Score = 84.2 bits (92), Expect = 9e-11
Identities = 116/162 (72%), Gaps = 3/162 (2%)
Strand=Plus/Plus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | ||| || ||||| || || |||||||| |||||||||||| || ||
Sbjct 124806 CTCAATCAAATGGGCAATTGTCATTCGCGATGGAATGGCGTGAGGGTTGATGATGATATC 124865
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803
|| | | || | || ||||||||||||| || | | | | ||| ||
Sbjct 124866 GGGAGTAAGACCTTC---TCGGCTGAAAGGCATATCCTCCTGTCGATATGTAACACCGAT 124922
Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
|| ||||||||| |||| | ||||||||||||||||||||
Sbjct 124923 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 124964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951946164080312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |