Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702515
.1_202016-08-10] 1,325 sequences; 51,394,345 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1216 239 4e-58
>seq1216
Length=971295
Score = 239 bits (264), Expect = 4e-58
Identities = 1060/1666 (64%), Gaps = 32/1666 (2%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | |
Sbjct 777348 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 777289
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| |||||| || || || || | ||||| || | | || ||| || | ||
Sbjct 777288 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGAT 777229
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896
|| | || ||| | | | || ||| ||| | || |||| || |
Sbjct 777228 ATCGAGCGAGTCTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATG-CCTC 777170
Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956
|| || || |||||||| || ||||| ||| || |||| || || ||| || |
Sbjct 777169 TCCCACGCTCTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 777110
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| |||| || ||||| | ||| | |||||| |||||| | |||||
Sbjct 777109 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 777050
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074
|| || || || || || | | || ||| |||| ||||| | || ||||||
Sbjct 777049 CAAGATGGCTGGTGGTATTGGTCTGAACGTGCAC--CGTATCCGTGCTACTGGCTCCTAC 776992
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| ||||||||| || || || ||||| | || |||||||| || ||||||||||||
Sbjct 776991 ATCGCCGGTACCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 776932
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || ||||| || ||||||||||| | | | ||| |||| || |||| |||
Sbjct 776931 ACTGCTCGCTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 776872
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||| | || || | ||| | || || || ||||||||||| || ||
Sbjct 776871 GAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAG 776812
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | ||| | ||||| ||| ||| || ||| | || || ||||| ||||| ||
Sbjct 776811 GAGGTCCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 776752
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| || || ||| || ||||| || | || ||||| || || || || || |||||
Sbjct 776751 GTTGAAAAGAACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGAC 776692
Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434
| ||| | || || | |||| | ||||| | ||||||||| |
Sbjct 776691 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 776632
Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494
||| ||| | ||| ||| || ||| | || | || | ||| ||||| ||
Sbjct 776631 AAGACTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGA 776572
Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554
| || | ||| | | |||||| | |||| |||| |||||| || |||||||
Sbjct 776571 AACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGT 776512
Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614
||| ||||| || |||||||| || ||| | ||||| | | || |||||| |
Sbjct 776511 ACCATCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTC 776452
Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674
||||| || ||||| | ||| | ||| || ||||| | | | |||| |
Sbjct 776451 GCTGTCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCAT-CAA-----CTAC---GAT 776401
Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAACC 94732
|||| | ||| | || || | || | | | ||| || | || ||||
Sbjct 776400 GAGGCTTGCTACGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTATTCGCAACC 776343
Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792
|||||| | | ||||| |||| |||||| |||| |||||| ||| ||| ||
Sbjct 776342 TGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGC 776283
Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852
|| || ||||| || | || || ||||| | || || || | | ||||
Sbjct 776282 GCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGCA 776223
Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912
|||||| ||| || ||| || | | || | | || ||||| | ||||||
Sbjct 776222 TGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACC 776163
Query 94913 ACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972
||| ||| | | ||||| || |||| | ||| | || || || | |
Sbjct 776162 ACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACCT 776106
Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032
|| || || ||| |||| || | ||||||||| | ||| || |||||||
Sbjct 776105 TCAAAGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCT 776046
Query 95033 CGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACG 95092
| | || | |||||||| |||| || | || || | | |||||| | |||
Sbjct 776045 CTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACA 775986
Query 95093 CGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGT 95152
||||| | || || ||||| || ||| || | ||||| || |||||||||||||
Sbjct 775985 GTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGT 775926
Query 95153 CGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCG 95212
||||| |||| |||||||||| | ||| | | || || ||||| || || |||| |
Sbjct 775925 GCTTCGAGCCCTACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGG 775866
Query 95213 TCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGTC 95271
| ||||| || || ||||| || || | ||||| ||||| || |
Sbjct 775865 TTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTATG 775807
Query 95272 AAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327
||||||| | |||| | || || ||| | |||||||| || | || || |
Sbjct 775806 AAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGC 775751
Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| ||||||| || || |||||||| ||||||||| | ||||||
Sbjct 775750 CGATGTCAAGGCTCTGTATAAGACCGTTTGGGAGATCTCTCAGCGC 775705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494715006147000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |