Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702545
.1_202016-08-10] 3,866 sequences; 57,435,926 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1089 134 2e-26
>seq1089
Length=741908
Score = 134 bits (148), Expect = 2e-26
Identities = 322/482 (67%), Gaps = 9/482 (2%)
Strand=Plus/Plus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361
|| || ||| | || |||||||||||| ||| || || | || ||| | || ||||
Sbjct 539634 CAGCCCAACTCTGGTGCACAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 539691
Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420
| | ||| || || | ||||| |||| || || | || || | || || || ||
Sbjct 539692 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCGGCTCACGGT 539750
Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480
|| || ||||| || || | ||||| || ||||| ||||| |||||||||||| | |
Sbjct 539751 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 539810
Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537
| ||| ||| | || ||| | ||||| || || ||| | | | |||
Sbjct 539811 AAGACTGGTAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAG 539870
Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597
|| | ||| ||| |||| ||||| ||||| ||||| || || | | ||||
Sbjct 539871 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 539930
Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657
|| | ||| | |||| || ||| |||| |||| || || | || ||||| || |
Sbjct 539931 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 539990
Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717
|| || ||| | ||||| | || ||||| |||||| ||||| || ||||| |||
Sbjct 539991 AACGCCCAGATCGGTCTTTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTCAAC 540050
Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777
| || ||||| ||||||||||| || || || || ||||| || || || ||||| | |
Sbjct 540051 CTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGTGGTCCCGGTGTTGGCCCTATCGCT 540110
Query 159778 GT 159779
||
Sbjct 540111 GT 540112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588022782425760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |