Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702545 .1_202016-08-10] 3,866 sequences; 57,435,926 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3657 96.9 3e-14 >seq3657 Length=4224935 Score = 96.9 bits (106), Expect = 3e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 1406768 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCAGCACGT 1406709 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || || ||||| |||| || |||| Sbjct 1406708 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTCGGTGTCCCTCGCAGTATT 1406649 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440 || | | || || | | ||||| ||| ||| Sbjct 1406648 GCCAGGACCCTCACCTATCCCGAAACTGTGACA 1406616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740440595737716