Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702545 .1_202016-08-10] 3,866 sequences; 57,435,926 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3504 93.3 1e-13 >seq3504 Length=162315 Score = 93.3 bits (102), Expect = 1e-13 Identities = 125/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||| | | |||| || || ||||| |||| || || || | || || || || || | Sbjct 155071 CTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGT-GCCT 155013 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | ||||| ||||||||| | || |||||||| || |||| |||||||||||| |||| Sbjct 155012 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACG 154953 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 | || ||| ||| || |||||| | || ||||| ||||| || ||| || Sbjct 154952 AGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 154900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588257324754370