Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702575 .1_202016-08-10] 1,743 sequences; 51,983,016 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq857 100 3e-16 >seq857 Length=137164 Score = 100 bits (110), Expect = 3e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 20245 AACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAA 20304 |||||| |||||||| | |||||| || | |||||||||||||| || ||||||||||| Sbjct 135701 AACATGGGCAAGCATGTGAGTTAACAGCGCGTAGCTGGCAATGTTGAAGGGAACTCCCAA 135760 Query 20305 ACCCATGTCTCCCGACCTCTGATACAGCTGACA 20337 |||||| || | ||||| ||||| |||||||| Sbjct 135761 ACCCATATCGCAAGACCTTTGATATAGCTGACA 135793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441363183590120