Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702575 .1_202016-08-10] 1,743 sequences; 51,983,016 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1024 91.5 5e-13 >seq1024 Length=868656 Score = 91.5 bits (100), Expect = 5e-13 Identities = 120/165 (73%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || ||||| |||| || || || | || || || || || || ||||| Sbjct 775586 AGCGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGT-GCCTTCGCCTCT 775528 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || |||||||| || |||| |||||||||||| ||||| || ||| Sbjct 775527 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATC 775468 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 ||| || |||||| | || ||||| ||||| || ||| || Sbjct 775467 TCTCGTGATGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 775423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588300528982635