Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702615 .1_202016-08-10] 3,557 sequences; 56,803,069 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq102 87.8 1e-12 >seq102 Length=1299131 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || || || ||||||||||| |||| | | |||| || | || Sbjct 987480 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 987421 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | ||||| || || |||||| ||||| || |||||||| ||| ||| Sbjct 987420 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 987361 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || ||||| ||| | || || || | ||| ||||| || || ||| Sbjct 987360 GACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTC 987301 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | || || || || || ||||| Sbjct 987300 AAGGTCTTGACGAAGATCTGCAT 987278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357376506721745