Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001702655 .1_202016-08-10] 1,501 sequences; 51,609,830 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq324 96.9 3e-15 >seq324 Length=941764 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || ||||| || |||||||| || || | || || || Sbjct 283238 ACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCC 283179 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| |||||||| | || | || || ||||| || ||||||||||| || Sbjct 283178 ATCTTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTT 283119 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | || || || || ||||| ||||| || Sbjct 283118 GTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAAT 283059 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | ||| || || || || ||||| Sbjct 283058 GGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 283023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385212153016641