Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455 .1_202016-08-10] 1,133 sequences; 48,659,641 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=1384398 Score = 86.0 bits (94), Expect = 5e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 || || || |||| ||| || | || | ||||| || || || ||| ||| | Sbjct 692865 TTGAGGGCGTCAACGTGGTCGAGGTACACATGAGCGTCACCCATGACATGAGTAAGGCTT 692924 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 ||||| ||||| | | ||||| |||| |||| |||||| || | ||||| |||||| Sbjct 692925 CCAGGAACTAGTTCACAAACATGGGCAAGCATGTGAGTTAACAGCGCGTAGCTGGCAATG 692984 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACA 101847 || || || ||||| || |||||||| || ||||||||||| ||||| Sbjct 692985 TTGAAGGGAACTCCCAAACCCATATCGCAAGACCTTTGATACAGCTGACA 693034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361246211685383