Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455
.1_202016-08-10] 1,133 sequences; 48,659,641 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq284 100 6e-16
>seq284
Length=101724
Score = 100 bits (110), Expect = 6e-16
Identities = 168/242 (69%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842
||||| || |||| ||| | | ||||| | ||| | | ||||| ||||| ||
Sbjct 50853 TGGACTCTGCCATTGTCTATGACCGCGATTTCCAATACCAATACTTTGGCTTCAAGACTT 50912
Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902
||||| ||| || |||||||| ||||| || ||||| || || || ||||||||||
Sbjct 50913 TGGAGCGATCATACCTCCTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCAGCACATGA 50972
Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962
| ||||| ||| |||| || ||| ||||| || ||| | || | ||||| ||||
Sbjct 50973 TCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGTCTTGGAGACATACA 51032
Query 248963 CCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA 249019
| ||| || || || | |||||||| | || ||||||||||||||||| |
Sbjct 51033 ACCTGATGTCCAGCAAATTCT---TCACACATGCTTCTCCCACGCTCTTCAACGCCGGCA 51089
Query 249020 CC 249021
||
Sbjct 51090 CC 51091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073750812602944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |