Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455
.1_202016-08-10] 1,133 sequences; 48,659,641 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq284 87.8 4e-12
>seq284
Length=101724
Score = 87.8 bits (96), Expect = 4e-12
Identities = 172/252 (68%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || ||| |||||||| || || ||||||||
Sbjct 51201 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 51142
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910
|| || || | | | | | |||||| || || | |||||| ||| | | ||
Sbjct 51141 CTGTCGTCCTTCATATCGACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTGCCGGC 51083
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| || || ||||| |||||||| || || | | || ||||| || | ||||| ||
Sbjct 51082 GTTGAAGAGCGTGGGAGAAGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTC 51023
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
| ||| | ||| || || ||| || |||| ||||||||| ||||||| |||
Sbjct 51022 CAAGACTCGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTG 50963
Query 95031 AGGGCGCTCAAC 95042
||||||||| ||
Sbjct 50962 AGGGCGCTCGAC 50951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989569634642015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |