Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455
.1_202016-08-10] 1,133 sequences; 48,659,641 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq207 104 2e-17
seq168 84.2 2e-11
>seq207
Length=801058
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | |||||||| | || || | ||| | || ||| |
Sbjct 248221 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 248162
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | || || ||||| ||||| || || || ||||||||||||
Sbjct 248161 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 248102
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||||||| | || ||||| ||||| ||||||| ||| | |||||| |||
Sbjct 248101 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGAACTCTTTCCGACTACAAC 248042
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || ||||||||| |||| |||| ||
Sbjct 248041 ATTCAGAAGGAATCTACTCTCCACTTGGTTCT 248010
>seq168
Length=541571
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || || || | || || || |||||||| | || | || ||
Sbjct 348862 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 348803
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|||||||||||| | ||||| ||||| ||||| || || || || || ||
Sbjct 348802 TTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 348743
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| || ||||||| | | ||||| || ||||| |||| | | | | ||||||||
Sbjct 348742 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTGAGCGACTA 348683
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || || |||| ||||||||
Sbjct 348682 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 348647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478655620943760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |