Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455
.1_202016-08-10] 1,133 sequences; 48,659,641 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq284 224 1e-53
>seq284
Length=101724
Score = 224 bits (248), Expect = 1e-53
Identities = 1057/1666 (63%), Gaps = 32/1666 (2%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | |
Sbjct 50888 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 50947
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| |||||| || || || || | ||||| || | | || ||| || | ||
Sbjct 50948 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGAT 51007
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896
|| | || ||| | | | || ||| ||| | || |||| | |
Sbjct 51008 ATCGAGCGAGTCTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATG-CTTC 51066
Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956
|| || || |||||||| || ||||| ||| || |||| || || ||| || |
Sbjct 51067 TCCCACGCTCTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTCGA 51126
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| |||| || ||||| | ||| | |||||| |||||| | |||||
Sbjct 51127 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 51186
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074
|| || || || || || | | || ||| |||| ||||| | || ||||||
Sbjct 51187 CAAGATGGCTGGTGGTATTGGTCTGAACGTGCAC--CGTATCCGTGCTACTGGCTCCTAC 51244
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| ||||||||| || || || ||||| | || |||||||| || ||||||||||||
Sbjct 51245 ATCGCCGGTACCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 51304
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || ||||| || ||||||||||| | | | ||| |||| || |||| |||
Sbjct 51305 ACTGCTCGCTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 51364
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||| | || || | ||| | || || || ||||||||||| || ||
Sbjct 51365 GAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAG 51424
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | ||| | ||||| ||| ||| || ||| | || || ||||| ||||| ||
Sbjct 51425 GAGGTCCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 51484
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| || || ||| | ||||| || | || ||||| || || || || || |||||
Sbjct 51485 GTTGAAAAGAACGGTGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGAC 51544
Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434
| ||| | || || | |||| | ||||| | ||||||||| |
Sbjct 51545 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 51604
Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494
||| ||| | ||| ||| || ||| | || | || | ||| ||||| ||
Sbjct 51605 AAGACTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGA 51664
Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554
| || | ||| | | |||||| | |||| |||| |||||| || |||||||
Sbjct 51665 AACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGT 51724
Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614
||| ||||| || |||||||| || ||| | ||||| | | || |||||| |
Sbjct 51725 ACCATCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTC 51784
Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674
||||| || ||||| | ||| | ||| || ||||| | | | |||| |
Sbjct 51785 GCTGTCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCAT-CAA-----CTAC---GAT 51835
Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAACC 94732
|||| | ||| | || || | || | | | ||| || | || ||||
Sbjct 51836 GAGGCTTGCTACGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTGTTCGCAACC 51893
Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792
|||||| | | ||||| |||| |||||| |||| |||||| ||| ||| ||
Sbjct 51894 TGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGC 51953
Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852
|| || ||||| || | || || ||||| | || || || | | ||||
Sbjct 51954 GCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGCA 52013
Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912
|||||| ||| || || || | | || | | || ||||| | ||||||
Sbjct 52014 TGCCCTTCGAGTCACCGGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACC 52073
Query 94913 ACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972
||| ||| | | ||||| || |||| | ||| | || || || | |
Sbjct 52074 ACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCTACCT 52130
Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032
|| || || ||| |||| || | ||||||||| | ||| || |||||||
Sbjct 52131 TCAAAGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCT 52190
Query 95033 CGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACG 95092
| | || | |||||||| |||| || | || || | | |||||| | |||
Sbjct 52191 CTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACA 52250
Query 95093 CGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGT 95152
||||| | || || ||||| || ||| || | ||||| || |||||||||||||
Sbjct 52251 GTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGT 52310
Query 95153 CGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCG 95212
||||| |||| |||||||||| | ||| | | || || ||||| || || |||| |
Sbjct 52311 GCTTCGAGCCCTACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGG 52370
Query 95213 TCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGTC 95271
| ||||| || || ||||| || || | ||||| ||||| || |
Sbjct 52371 TTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTATG 52429
Query 95272 AAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327
||||||| | |||| | || || ||| | |||||||| || | || || |
Sbjct 52430 AAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGC 52485
Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| ||||||| || || |||||||| ||||||||| | ||||||
Sbjct 52486 CGATGTCAAGGCTCTGTATAAGACCGTTTGGGAGATCTCTCAGCGC 52531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494716193482680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |