Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455 .1_202016-08-10] 1,133 sequences; 48,659,641 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq613 104 2e-16 >seq613 Length=1729140 Score = 104 bits (114), Expect = 2e-16 Identities = 197/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| || || ||||| ||||| ||||| | ||| | || | |||| | || Sbjct 648793 ACCAGACGGTTGTCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACC 648852 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || |||| | | |||| ||||| ||| |||||||| | ||| Sbjct 648853 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAAACATCGAAGGTACCACCACCAAGATCG 648912 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || ||||||||||| || |||| || ||| Sbjct 648913 AAGATGAGGACGTTGCGCTCGCCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCGGCA 648972 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || |||| | ||| || ||||| || || || ||||| || Sbjct 648973 GCAGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTG 649032 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || ||||| | || |||||||| || || || || ||||||| ||| || Sbjct 649033 GTAGCTTGACGCTGAGAATCGTTGAAGTAGGCGGGGACAGTAACAACAGC 649082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780766176807898