Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455 .1_202016-08-10] 1,133 sequences; 48,659,641 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq69 84.2 9e-11 >seq69 Length=726092 Score = 84.2 bits (92), Expect = 9e-11 Identities = 116/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||| || || |||||||| |||||||||||| || || Sbjct 124907 CTCAATCAAATGGGCAATTGTCATTCGCGATGGAATGGCGTGAGGGTTGATGATGATATC 124966 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || | | || | || ||||||||||||| || | | | | ||| || Sbjct 124967 GGGAGTAAGACCTTC---TCGGCTGAAAGGCATATCCTCCTGTCGATATGTAACACCGAT 125023 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 125024 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 125065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951946064041624