Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cucumerinum_20[genbank_20GCA_5F001703455
.1_202016-08-10] 1,133 sequences; 48,659,641 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq613 109 4e-18
>seq613
Length=1729140
Score = 109 bits (120), Expect = 4e-18
Identities = 198/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241
|| ||||| || || ||||| ||||| ||||| | ||| | || | |||| | ||
Sbjct 648793 ACCAGACGGTTGTCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACC 648852
Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301
| ||| | || || |||| | | |||| |||||| ||| |||||||| | |||
Sbjct 648853 TCGAAGATACCCTCCTCAATGGTAAGGAGAGAAACATCGAAGGTACCACCACCAAGATCG 648912
Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361
|| || || || || || || || ||||||||||| || |||| || |||
Sbjct 648913 AAGATGAGGACGTTGCGCTCGCCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCGGCA 648972
Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421
||||| || || || || |||| | ||| || ||||| || || || ||||| ||
Sbjct 648973 GCAGTAGGCTCGTTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTG 649032
Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
|| ||||| | || |||||||| || || || || ||||||| ||| ||
Sbjct 649033 GTAGCTTGACGCTGAGAATCGTTGAAGTAGGCGGGGACAGTAACAACAGC 649082
Score = 96.9 bits (106), Expect = 3e-14
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| || |||||| || |||| || |||||||| ||||||||||| | || ||||||
Sbjct 926777 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 926836
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || |||||| |||| | || || |||| | || || |||||||| | || ||||
Sbjct 926837 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTCGGTGTTCCACGCAGTATT 926896
Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440
|| | | || || | | ||||| ||| |||
Sbjct 926897 GCCAGGACCCTCACCTATCCCGAAACTGTGACA 926929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740574774488058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |