Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_
202017-07-27] 2,454 sequences; 53,227,347 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq225 176 5e-39
>seq225
Length=1102471
Score = 176 bits (194), Expect = 5e-39
Identities = 570/880 (65%), Gaps = 10/880 (1%)
Strand=Plus/Minus
Query 53785 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 53844
|||||| || | || | ||| || ||||| ||| || |||||||| || || |||||
Sbjct 390902 GATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 390843
Query 53845 TGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTAT 53904
||| | || || ||| |||||| || | ||| || | ||| | ||||||| ||
Sbjct 390842 TGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGAT 390783
Query 53905 TATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGTTCAAACTCGTC 53961
|| ||| | ||| | ||| ||||| | |||| || ||||| ||
Sbjct 390782 ---AGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTC 390726
Query 53962 TCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 54021
||| || | | | | ||||| || || | || ||||||| || ||| || ||||
Sbjct 390725 TCCGTAACAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACATCAGCGTCCAGTCGCCGTT 390666
Query 54022 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 54081
| | || || ||||| || |||||||| |||||||| || | || || || | ||
Sbjct 390665 CTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGC 390606
Query 54082 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 54141
| ||||| || || ||||| ||||| |||||| | | | |||||| ||
Sbjct 390605 ACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTG 390546
Query 54142 CCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 54201
||| || || | ||| |||| | | | || || || ||||| || ||||| || | ||
Sbjct 390545 CCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATA 390486
Query 54202 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 54261
| ||| ||||| || | || | | ||| |||| || ||| || |||| ||| |||||
Sbjct 390485 GCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGT 390426
Query 54262 CCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAGACCTATCCCCCCT 54319
|||| || ||| ||| | ||||| ||| | | || | | || || || ||
Sbjct 390425 ACCGGCAATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCA--GGCCAATACCACCA 390368
Query 54320 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 54379
||||| || ||||| | || || || | ||||| ||||| ||||| ||||| ||
Sbjct 390367 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCG 390308
Query 54380 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 54439
||| |||| | || | || || |||| |||| | || || || || || ||
Sbjct 390307 TCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAG 390248
Query 54440 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT 54499
| || ||||| || || || || |||| || | || ||||| ||||| | ||
Sbjct 390247 AGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGACT 390188
Query 54500 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 54559
|| ||||| ||| || || | |||||||| | |||||||||||| |
Sbjct 390187 CGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTGAGGGCGC 390128
Query 54560 TCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 54619
|| || ||||| || || || || | ||| ||| |||||||| || || |||||
Sbjct 390127 TCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAG 390068
Query 54620 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659
|| | |||| || || || || || | ||| | ||||
Sbjct 390067 TATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGT 390028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593703387589920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |