Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_ 202017-07-27] 2,454 sequences; 53,227,347 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq225 176 6e-39 >seq225 Length=1102471 Score = 176 bits (194), Expect = 6e-39 Identities = 572/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 65816 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 65875 |||||| || | || | ||| || ||||| ||| || |||||||| || || ||||| Sbjct 390902 GATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 390843 Query 65876 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA 65934 ||| | || || ||| |||| | || | ||| || | ||| | | || ||||||| | Sbjct 390842 TGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA-GTTTCTGAGCCTTGA 390784 Query 65935 TTATAGATTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGTTCGAACTCGT 65991 | || ||| | ||| | ||| ||||| | |||| |||||||| | Sbjct 390783 T---AGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCT 390727 Query 65992 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 66051 |||| || | | | | ||||| || || | || ||||||| || ||| || |||| Sbjct 390726 CTCCGTAACAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACATCAGCGTCCAGTCGCCGT 390667 Query 66052 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGG 66111 | | || || ||||| || |||||||| |||||||| || | || | || | || Sbjct 390666 TCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGG 390607 Query 66112 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAAT 66171 | ||||| || || ||||| ||||| |||||| | | | |||| | | Sbjct 390606 CACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGT 390547 Query 66172 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 66231 |||| || || | ||| ||||| | | | || || || ||||| || ||||| || | | Sbjct 390546 GCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACAT 390487 Query 66232 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 66291 | | ||| ||||| || | || | | ||| |||| || ||| || |||||||| |||| Sbjct 390486 AGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGG 390427 Query 66292 TCCCGGAGATATAGCTTCCACTTGCACGAATAT--TACTAATTGATAGACCTATTCCCCC 66349 | |||| || ||| ||| | ||||| ||| | | || | | || || || || Sbjct 390426 TACCGGCAATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCA--GGCCAATACCACC 390369 Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 66409 ||||| || ||||| | || || || | ||||| ||||| ||||| ||||| || Sbjct 390368 AGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTC 390309 Query 66410 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 66469 ||| |||| | || | || || |||| |||| | || || || || || || Sbjct 390308 GTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAA 390249 Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529 | || ||||| || || || || |||| || | || ||||| ||||| | | Sbjct 390248 GAGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGAC 390189 Query 66530 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589 | || ||||| ||| || || | |||||||| | |||||||||||| | Sbjct 390188 TCGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTGAGGGCG 390129 Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 || || ||||| || || || | | ||| ||| |||||||| || || ||||| Sbjct 390128 CTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAA 390069 Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690 || | |||| || || || || || | ||| | |||| Sbjct 390068 GTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGT 390028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658152610549360