Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_
202017-07-27] 2,454 sequences; 53,227,347 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq225 356 6e-93
>seq225
Length=1102471
Score = 356 bits (394), Expect = 6e-93
Identities = 1122/1703 (66%), Gaps = 54/1703 (3%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458
||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| ||
Sbjct 390078 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 390136
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516
||| ||| | |||||||| || ||||||| ||| || || |||| || ||| |
Sbjct 390137 GCACATGATCATGCGTGTGTCTGTTGGTAT---TTG---GGGTGATGATATCGAGCGAGT 390190
Query 363517 ----GAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAACAAT 363569
|| ||||| || || | || || | | ||||| || ||| | || || |
Sbjct 390191 CTTGGAGACATACAACCTGAT--GTCCAGCAAAT-TCTTCACACATGCCTCTCCCACGCT 390247
Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629
| ||| || || || | | | || || |||| |||||||| | | | ||||||||
Sbjct 390248 CTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGA 390307
Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689
||| || ||||| |||| || || || |||| ||||| | || ||||||| ||
Sbjct 390308 CGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 390367
Query 363690 AGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747
|| || ||||| | | || | ||| | | ||||| || | | |||||| |||
Sbjct 390368 TGGTGGTATTGGCCTGAACG-TGCACCGTATCCGTGCTACTGG-CTCCTACATTGCCGGT 390425
Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| || ||| ||||| || | ||||| ||||||||||| || |||| ||||| |
Sbjct 390426 ACCAACGG-TACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 390484
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
|| |||||||||||||| ||||| || || ||||| || || |||||||||
Sbjct 390485 CTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 390544
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| | ||| | || ||||| ||||| ||||| || ||| || |||||||| | ||
Sbjct 390545 GCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCG 390604
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
||| ||||| || ||| || |||||| | |||| | ||| |||||||| || ||
Sbjct 390605 TGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA--A 390662
Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATG 364043
| | | | | ||| | || | ||||| |||| || || || || |||| ||| |
Sbjct 390663 AAGAACGGCGACTGGACGCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCCGACTGT-TA 390721
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103
|| || || | | ||||| ||||||||||| || |||||| |||| ||| |||||
Sbjct 390722 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGAC 390781
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
|| || ||||| || |||| ||||| | || | |||| |||||| |||| ||
Sbjct 390782 TATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 390841
Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
| ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| |
Sbjct 390842 ATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA- 390900
Query 364224 TCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| | || |||||| || || || |||||||| ||| || || |||||| || |
Sbjct 390901 TCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTG 390960
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTG 364336
| || |||||||| || | || || || | || | | | |||| || | ||
Sbjct 390961 TCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCATCAACTACGATGAGGCTTGCTATG 391020
Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
|| | || | | | | || | | || || | |||| || ||||| | ||||
Sbjct 391021 ACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCG 391080
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATT 364455
| ||| | || || ||| | || | || ||| ||||| || || || |||
Sbjct 391081 ATGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATT 391139
Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATT 364513
||||||||||| |||||||| || || | ||| | ||||| ||| | || || |
Sbjct 391140 GGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGT 391197
Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573
| || || ||||||| || || ||| ||||||| || || || || || || | |
Sbjct 391198 CACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTCA 391257
Query 364574 CTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632
||| || |||| | |||| || |||| ||||| || | | || |||||
Sbjct 391258 CTGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCCC 391316
Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692
|| |||| | ||||||| || | ||||| |||| ||| |||| || ||| ||
Sbjct 391317 GCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGAC 391376
Query 364693 TGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACA 364749
||||| || || || | || |||| || || | || ||| || ||| ||
Sbjct 391377 TGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTT--- 391433
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| || ||||| || || ||| | ||||| || || ||||||||||||||||| ||
Sbjct 391434 GCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCC 391493
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
| || ||| | || ||| || ||||| | || || || | ||| || ||
Sbjct 391494 TACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCC 391553
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| || ||||||| ||| |||| || |||||| || ||||||||| |||
Sbjct 391554 TGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATC 391613
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989
|| || | |||||||| | ||||||||||| | || | ||| | ||| || |
Sbjct 391614 ATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTG 391673
Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049
|| || ||||| ||||| || || ||| || || | ||||| || ||||| |||
Sbjct 391674 TATAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGT 391733
Query 365050 GCTTTTATCTGTCAGAGCCAGTC 365072
|| || || |||| ||||||
Sbjct 391734 GCCTTCATTGATCAGTCCCAGTC 391756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303312620119028
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |