Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_ 202017-07-27] 2,454 sequences; 53,227,347 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq545 89.7 4e-13 >seq545 Length=357985 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || || |||||| | ||| | |||||| |||||||||| |||||||| ||||| || Sbjct 100352 GACAAGGAGGGTATTCCTCCCGATCAACAGCGACTTATCTTCGCTGGCAAGCAACTTGAG 100293 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| |||| | |||| ||||| |||||||||||||||||||| || |||| | Sbjct 100292 GATGGCCGAACTCTTTCCGACTACAACATTCAGAAGGAATCTACTCTCCACTTGGTTCTC 100233 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 100232 CGTCTTCGTGGTGG 100219 Score = 87.8 bits (96), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCT 21966 || ||||| ||| ||| ||||| |||||| | ||| |||| ||| | || |||| Sbjct 100600 ATGTTAAGTCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAGCGCCTGATCT 100541 Query 21967 TTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAAT 22026 ||||||| || ||||| ||||| ||| | ||||| ||||| ||||||||||||| Sbjct 100540 TTGCTGGAAAGCAACTCGAAGACGGCCGAACCCTTGCCGACTACAACATTCAGAAGGAAT 100481 Query 22027 CTACTCTTCAT 22037 |||| |||||| Sbjct 100480 CTACCCTTCAT 100470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358114089158716