Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_ 202017-07-27] 2,454 sequences; 53,227,347 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq225 230 2e-55 >seq225 Length=1102471 Score = 230 bits (254), Expect = 2e-55 Identities = 1058/1666 (64%), Gaps = 32/1666 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 390060 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 390119 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || ||| || | || Sbjct 390120 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGAT 390179 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | || ||| ||| | || |||| || | Sbjct 390180 ATCGAGCGAGTCTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATG-CCTC 390238 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || || || |||||||| || ||||| ||| || |||| || || ||| || | Sbjct 390239 TCCCACGCTCTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 390298 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || ||||| | ||| | |||||| |||||| | ||||| Sbjct 390299 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 390358 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | || ||| |||| ||||| | || |||||| Sbjct 390359 CAAGATGGCTGGTGGTATTGGCCTGAACGTGCAC--CGTATCCGTGCTACTGGCTCCTAC 390416 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||||||||| || || || ||||| | || |||||||| || |||||||||||| Sbjct 390417 ATTGCCGGTACCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 390476 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || ||||| || ||||||||||| | | | ||| |||| || |||| ||| Sbjct 390477 ACTGCTCGCTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 390536 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | ||| | || || || ||||||||||| || || Sbjct 390537 GAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAG 390596 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||||| ||| ||| || ||| | || || ||||| ||||| || Sbjct 390597 GAGGTCCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 390656 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| || ||||| || | || || || || || || || || ||||| Sbjct 390657 GTTGAAAAGAACGGCGACTGGACGCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCCGAC 390716 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 || ||| | || || | |||| | ||||| | ||||||||| | Sbjct 390717 TGTTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 390776 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| ||| | ||| ||| || ||| | || | || | ||| ||||| || Sbjct 390777 AAGACTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGA 390836 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | ||| | | |||||| | |||| |||| |||||| || ||||||| Sbjct 390837 AACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGT 390896 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || |||||||| || ||| | ||||| | | || |||||| | Sbjct 390897 ACCATCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTC 390956 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674 ||||| || ||||| | ||| | ||| || ||||| | | | |||| | Sbjct 390957 GCTGTCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCAT-CAA-----CTAC---GAT 391007 Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAACC 94732 |||| | || | || || | || | | | ||| || | || |||| Sbjct 391008 GAGGCTTGCTATGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTATTCGCAACC 391065 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 |||||| | | ||||| |||| |||||| |||| |||||| ||| ||| || Sbjct 391066 TGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGC 391125 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852 || || ||||| || | || || ||||| | || || || | | |||| Sbjct 391126 GCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGCA 391185 Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912 |||||| ||| || ||| || | | || | | || ||||| | |||||| Sbjct 391186 TGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACC 391245 Query 94913 ACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972 ||| ||| | | ||||| || |||| | ||| | || || || | | Sbjct 391246 ACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACCT 391302 Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032 || || || ||| |||| || | ||||||||| | ||| || ||||||| Sbjct 391303 TCAAAGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCT 391362 Query 95033 CGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACG 95092 | | || | |||||||| |||| || | || || | | |||||| | ||| Sbjct 391363 CTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACA 391422 Query 95093 CGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGT 95152 ||||| | || || ||||| || ||| || | ||||| || ||||||||||||| Sbjct 391423 GTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGT 391482 Query 95153 CGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCG 95212 ||||| |||| |||||||||| | ||| | | || || ||||| || || |||| | Sbjct 391483 GCTTCGAGCCCTACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGG 391542 Query 95213 TCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGTC 95271 | ||||| || || ||||| || || | ||||| ||||| || | Sbjct 391543 TTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTATG 391601 Query 95272 AAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327 ||||||| | |||| | || || ||| | |||||||| || | || || | Sbjct 391602 AAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGC 391657 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || || |||||||| ||||||||| | |||||| Sbjct 391658 CGATGTCAAGGCTCTGTATAAGACCGTTTGGGAGATCTCTCAGCGC 391703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494708024365840