Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_
202017-07-27] 2,454 sequences; 53,227,347 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq225 232 8e-56
seq2256 147 3e-30
>seq225
Length=1102471
Score = 232 bits (256), Expect = 8e-56
Identities = 1137/1784 (64%), Gaps = 43/1784 (2%)
Strand=Plus/Plus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| ||||| ||||||| || | | ||||| || || ||||| || ||
Sbjct 390131 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGT 390190
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
|||||||||||| || ||||||| | | |||| || || | || || |||||
Sbjct 390191 CTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATGCCTCTCCCACGCTCTT 390250
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| || || || |||||| |||| ||| ||| | ||| | ||||| ||
Sbjct 390251 CAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGA 390310
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| | || || |||| ||||||| |||||| ||||| ||| ||||||
Sbjct 390311 CAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 390370
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908
|||||| || || || | || | || | || | | ||| || || |||||
Sbjct 390371 TGGTATTGGCCTGAACGTGCACCGTATCCGTGCTACT--GGCTCCTACATTGCCGGTACC 390428
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| ||| ||| | ||| || |||| |||||||| || || ||| ||| || ||||||
Sbjct 390429 AACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTAT 390488
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| |||| | ||| ||| | | || || | || |||| || ||||| |||
Sbjct 390489 GTCGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGG 390545
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| ||
Sbjct 390546 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGT 390605
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
||| || || ||| ||| || ||||| || ||||| ||||||||| | ||||| ||
Sbjct 390606 GCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAG 390665
Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT--GG 112200
| ||| | ||| | || | || || || || || || ||| |||| | || |
Sbjct 390666 AACGGCGACTGGACGCTGATGTGCCCTAACGAGTGCCCTGGCCTCGCCGA--CTGTTACG 390723
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GAC 112258
| |||||||| || || || ||| ||||||||| |||| | | | | | | || |||
Sbjct 390724 GAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCAAGGGTC-GCAAGAC 390781
Query 112259 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
| ||| | | ||| | || ||||| || | || || ||||| || | ||
Sbjct 390782 TATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 390841
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378
|| ||||| ||||| || ||||| |||| ||||| || |||||||| | ||| ||
Sbjct 390842 ATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCAT 390901
Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438
| || |||||||| || || ||||| | || | | | || ||| |||||
Sbjct 390902 CCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGT 390961
Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG- 112497
|| ||||| || || | ||||| ||| | | | || || || | || |||
Sbjct 390962 CTGCAACCTTGCCTCTCTGGCTCTGCCC---TCT-TTCAT-CAACTACGATGAGGCTTGC 391016
Query 112498 -ATTA--TGAA-AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553
|| | | || || | ||| | || | | ||| | ||||| |||| |
Sbjct 391017 TATGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATC 391076
Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613
|| ||| || ||||| || || ||||| || ||| ||| | ||||| ||
Sbjct 391077 ATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCC 391136
Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 112672
|||||||| ||||| || || || || |||| ||| || || || ||| | || ||
Sbjct 391137 ATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGA 391195
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
|| ||| || || |||| || || || ||||| || || ||||| || ||
Sbjct 391196 GTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCT 391255
Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
|| | || |||| ||| || ||||| || ||||| | ||||| ||
Sbjct 391256 CACTGCCTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCC 391315
Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 112852
|| || | || | || || || || |||||| | | || || | || ||
Sbjct 391316 CGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGA 391375
Query 112853 CTGGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910
|||||| ||| || || | | | ||||| | || | ||||||||||| | |
Sbjct 391376 CTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTGCTCCTT 391433
Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970
|| || ||||| || ||| ||| | || || |||| || || || ||||| || |||
Sbjct 391434 GCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCC 391493
Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 113030
||||| | |||||||| | || | ||||| || ||||| | ||||||||
Sbjct 391494 TACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCC 391553
Query 113031 CATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 113090
|| | | ||||| || || ||||| |||||| | | ||||||| | | |||
Sbjct 391554 TGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATC 391613
Query 113091 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTG 113150
| | | |||||||||||| || ||| | || || | || | ||| ||
Sbjct 391614 ATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTG 391673
Query 113151 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210
|| || |||||||| ||| | | ||| || | ||||| || ||||| |||
Sbjct 391674 TATAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGT 391733
Query 113211 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268
||||||||||| |||| ||| |||| | |||| || || || ||| ||
Sbjct 391734 GCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAAGACCCCACAATGGGCA 391791
Query 113269 AGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327
|| || | ||||||| | | || | |||||| || || || || || ||||| |||
Sbjct 391792 AGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTTAAGACTGGCATGTACTAC 391850
Query 113328 CTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371
|| || | |||| || || |||||||||| | ||||
Sbjct 391851 CTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 391894
>seq2256
Length=1610869
Score = 147 bits (162), Expect = 3e-30
Identities = 180/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149
|||||| | ||||| | || | || || || | |||||| || || ||||| ||
Sbjct 1497554 CTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGA 1497495
Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208
||| | | | || | | | | ||||||| |||| ||| | || || || ||||||
Sbjct 1497494 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGA 1497436
Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268
||||||||||||| |||| ||||| | |||| | |||||||||||||| ||||||||
Sbjct 1497435 GGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 1497376
Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328
||| ||||| ||||||||||||||| ||||||||||| ||||| || ||| || ||
Sbjct 1497375 GCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTT 1497316
Query 102329 TGC 102331
|||
Sbjct 1497315 TGC 1497313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620723358726880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |