Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_ 202017-07-27] 2,454 sequences; 53,227,347 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1814 138 1e-27 >seq1814 Length=255193 Score = 138 bits (152), Expect = 1e-27 Identities = 323/482 (67%), Gaps = 9/482 (2%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || |||||||||||| ||| || || | || ||| | || |||| Sbjct 214175 CAGCCCAACTCTGGTGCACAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 214118 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || || | || || | || || || || Sbjct 214117 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCGGCTCACGGT 214059 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | | Sbjct 214058 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 213999 Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | ||||||| | || ||| | ||||| || || ||| | | | |||| Sbjct 213998 AAGACTGGCAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAA 213939 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| |||| ||||| ||||| ||||| || || | | |||| Sbjct 213938 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 213879 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || | ||| | |||| || ||| |||| |||| || || | || ||||| || | Sbjct 213878 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 213819 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || ||| | ||||| | || |||| |||||| ||||| || ||||| ||| Sbjct 213818 AACGCCCAGATCGGTCTTTGCAGCCCCGGTGATATTGGTGCTGATGTTTGCCATCTCAAC 213759 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 | || ||||| ||||||||||| || || || || ||||| || || || ||||| | | Sbjct 213758 CTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGTGGTCCCGGTGTTGGCCCTATCGCT 213699 Query 159778 GT 159779 || Sbjct 213698 GT 213697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588033161529440