Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_
202017-07-27] 2,454 sequences; 53,227,347 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2256 194 2e-44
seq225 194 2e-44
seq878 89.7 6e-13
>seq2256
Length=1610869
Score = 194 bits (214), Expect = 2e-44
Identities = 537/812 (66%), Gaps = 15/812 (2%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 1497025 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1497084
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | || ||| | || | |||| | ||||||||
Sbjct 1497085 AAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTG-CCAAGCGCGACAAGGAGACG 1497143
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| |||||||||||| ||| || |||||||| |||| ||| ||
Sbjct 1497144 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCGCA 1497203
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || || |||| ||| ||||||| || || || | ||| | ||
Sbjct 1497204 GGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATATCCTG 1497263
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
|| ||| | ||| || | | ||| | || | || ||| || |||||| ||
Sbjct 1497264 GATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 1497320
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| |||||||| ||||| |||||||| || || |||||| |||||| ||||||||
Sbjct 1497321 AGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAG 1497380
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | |||||| || | || | ||| ||||||||| ||||| ||
Sbjct 1497381 ACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 1497440
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203
| ||||| |||| |||||||| ||||||||| | ||| | | ||| ||
Sbjct 1497441 AGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGAT 1497500
Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263
||||| | ||||| || ||| || |||| ||||| || || | |||||| | |
Sbjct 1497501 GGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAGGTAGGT 1497560
Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323
| | || || |||||||| | || ||||| || || || ||| ||||
Sbjct 1497561 TCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGAT 1497620
Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382
| | ||| || | ||| | ||||||| | || || ||| ||||| |||||
Sbjct 1497621 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTC-G 1497678
Query 130383 CTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 130441
| | ||| | | || ||||| ||||| ||||| ||| |||| || || ||
Sbjct 1497679 CCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAGCGAAGAAAGCA 1497738
Query 130442 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGA 130498
||||| | | ||| ||| |||| | ||| || | |||||||| | |||
Sbjct 1497739 AGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCATGGAGA 1497798
Query 130499 TCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
||||| || ||||| | |||||| ||||||||
Sbjct 1497799 TCCTTGGAAAGATCAATCTCCTCAGCAGTCCA 1497830
>seq225
Length=1102471
Score = 194 bits (214), Expect = 2e-44
Identities = 1166/1844 (63%), Gaps = 47/1844 (3%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
|||||||||| || || |||| || || ||||||||||| || ||||| || |
Sbjct 391887 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTAAGGC 391828
Query 117865 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATG 117923
| |||||||| | | || | ||||| || | |||| | || || || ||||
Sbjct 391827 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATTGTGGGGTCTTTCATG 391769
Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983
|| ||||| ||||| ||||| |||||| || ||||| || ||||| | ||
Sbjct 391768 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 391709
Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043
|| | | ||| ||||| || ||| | || || ||| | ||| | |||||
Sbjct 391708 ACTTGGCGCTGAGAGATCTCCCAAACGGTCTTATACAGAGCCTTGACATCGGCAGGGATG 391649
Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103
| || || || ||||| ||| | | | ||| | | ||||||| | | |||
Sbjct 391648 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 391589
Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163
|| ||||| || | || |||| | || |||||||| ||||||||
Sbjct 391588 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 391529
Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223
||||| |||| | ||||| |||| ||||| ||||| |||||||| ||||| |||
Sbjct 391528 GCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 391469
Query 118224 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 118283
| || |||| || ||| || ||||| || || | ||| || |||||||||| ||
Sbjct 391468 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCG 391409
Query 118284 TTTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341
| | | | | | | | || || ||| |||||||| || | | || | |
Sbjct 391408 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 391351
Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401
|||||| || |||||||||||||| | || || || || || | || || || |
Sbjct 391350 TCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGG 391291
Query 118402 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458
| ||||| ||| |||| | ||||| || |||||| ||||| || || || |
Sbjct 391290 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGGTAAATGGTCT 391234
Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 118517
| || || | || | | |||||| || || || | | || || | |
Sbjct 391233 CGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAGAGCA 391175
Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577
| || |||| || || || || ||||| || ||||| || || || | ||| |||
Sbjct 391174 AGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 391115
Query 118578 TTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 118637
|| ||||| || || || || ||| |||||| | | | || || || |
Sbjct 391114 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 391055
Query 118638 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TG 118694
||||||| ||| | || | ||| | | | ||| | || || ||| || | ||
Sbjct 391054 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCATA---GCAAGCCTCATCGTAGTTG 390998
Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754
| | || || || | || || || || || |||| | ||| || || |
Sbjct 390997 ATGAAAGAGGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAG 390938
Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814
||||| |||||||| ||||||| ||| || || ||||| || | ||||||||| ||
Sbjct 390937 TACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTG 390878
Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874
||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| |
Sbjct 390877 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCC 390818
Query 118875 TTGAGAATAGCCTTCCAGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932
| ||||| || | ||| | | ||| || | | ||| || | ||||| |
Sbjct 390817 TCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGATAGTCTTGCG-ACCCTTG-CCCTCCT 390760
Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGG 118990
|||||||||| ||| || || || ||||| || || || | || | ||| || ||
Sbjct 390759 TCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAACAG--TCGGCGAGGCCAGG 390702
Query 118991 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 119050
|| | ||||| | || | ||| | || || ||||| ||||||||||| ||
Sbjct 390701 GCACTCGTTAGGGCACATCAGCGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAG 390642
Query 119051 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 119110
|| |||||||| || || ||| || || || || | || || | || || ||
Sbjct 390641 ATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTT 390582
Query 119111 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 119170
||| | || | || || | || ||| | |||||| || || ||||| | || |
Sbjct 390581 CTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAA 390522
Query 119171 TG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224
| || | ||| | | ||| |||||| ||||| | |||||| ||| || ||
Sbjct 390521 AGCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGAC 390465
Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTA 119282
||||||||| |||| | ||| | ||| || || || || || || ||| | |
Sbjct 390464 ACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCAATGTAGGAGCC--A 390407
Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342
| || | || | ||| | || || |||||||| || ||| ||| ||||| ||
Sbjct 390406 GTAGCACGGATACGGTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAGATCATGGCA 390347
Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402
|| | ||||| | ||||||| || || || ||| |||| | | | | ||||
Sbjct 390346 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 390287
Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462
|| |||| ||| ||| || || || ||||||||||| || || | || || ||
Sbjct 390286 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTG 390227
Query 119463 AACA--TACCTTGGGACATCTTGTCGTAGGTCTCCAAGAC-GGCGGGAATGTCTTCCCCG 119519
|| | | || ||||||| || ||| ||||||||||| || | || || || ||
Sbjct 390226 AAGAATTTGCT--GGACATCAGGTTGTATGTCTCCAAGACTCGCTCG-ATATCATCACCC 390170
Query 119520 TGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCG 119579
|||||| | || || ||||| | ||||| || || || | | |||| ||
Sbjct 390169 CAAATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCA 390110
Query 119580 AGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
| | | ||||||| |||||| ||||||| ||||| ||
Sbjct 390109 ATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 390066
>seq878
Length=667911
Score = 89.7 bits (98), Expect = 6e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 180879 CAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTT 180938
|| |||||||||||| || ||||| ||||||||| || |||||| || ||| ||| ||||
Sbjct 218809 CAGCTTGGCACCGTAACCGTTGCGACCACCAACAGTTTTCTTCTCGTCGTCGTCGAAGTT 218750
Query 180939 TGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTG 180998
| || || | || || || ||| |||| || ||| | | || | ||||||||||||
Sbjct 218749 GGAACCCGCCAACAGATGTCCGAAGATAAGCTCAGGAATGTAGATCTTCTCCTTTTCGTG 218690
Query 180999 CATA 181002
|||
Sbjct 218689 AATA 218686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618416229500240
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