Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20gladioli_20[genbank_20GCA_5F002233895.1_ 202017-07-27] 2,454 sequences; 53,227,347 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq225 163 4e-35 >seq225 Length=1102471 Score = 163 bits (180), Expect = 4e-35 Identities = 552/851 (65%), Gaps = 14/851 (2%) Strand=Plus/Minus Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| || || || || | |||||||||||| ||||| | ||||| || || || || Sbjct 390902 GATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 390843 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTA 77877 || | ||||| ||| |||| | || | ||| | | ||| | | ||| ||| || | Sbjct 390842 TGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAA-GTTTCTGAGCCTTGA 390784 Query 77878 TCATAGATTTGTATCGCCT---CTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATTC 77932 | || ||| | | | ||| | || || || ||| | |||| || || || Sbjct 390783 T---AGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCC--TCGAACTC 390729 Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992 ||||| || || | | |||||||| || || |||||||||| | |||||| || Sbjct 390728 CTCTCCGTAACAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACATCAGCGTCCAGTCGCC 390669 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 | | | ||| || ||||| || |||||||| ||||| || || | || || || || Sbjct 390668 GTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACG 390609 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112 || | || || || || ||||| ||||| || ||||| | | |||||| Sbjct 390608 GGCACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGA 390549 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 ||||| || || || || || || | | | || ||||| || || || ||||| || | Sbjct 390548 GTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGAC 390489 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 ||| | || ||||| || | || | | ||| |||| || |||||| ||||| || || Sbjct 390488 ATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTT 390429 Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCC 78292 || || | ||| || ||| | || || ||| | | | || || || || Sbjct 390428 GGTACCGGCAATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCAGGCCAATACCACC 390369 Query 78293 TGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTC 78352 |||||||| || || | || || || | ||||||||||| ||||| |||||||| Sbjct 390368 AGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTC 390309 Query 78353 ATCCATCATGTTAA-GAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 78411 ||| |||| | || ||||| || | |||| ||| | ||| || || || || | Sbjct 390308 GTCCTTCATATCAACCAAGAAGCAAGAT-GACAATTGGGGCTGAGGGGTGCCGGCGTTGA 390250 Query 78412 ATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAG 78471 | | || ||||| ||||| || || |||| || | || |||||||| || | Sbjct 390249 AGAGCGTGGGAGAGGCATGTGTGAAGAATTTGCTGGACATCAGGTTGTATGTCTCCAAGA 390190 Query 78472 CTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTC 78531 || || || || ||| || || | |||||||| | ||| |||||||| | Sbjct 390189 CTCGCTCGATATCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTGAGGGC 390130 Query 78532 TTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 78591 || || ||||| | || || | | ||||||| |||||||| || || |||| Sbjct 390129 GCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAA 390070 Query 78592 AATAGTTGTAT 78602 | || | |||| Sbjct 390069 AGTATTGGTAT 390059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694647491034560